# Comparing Means in R

Previously, we described the essentials of R programming and provided quick start guides for importing data into **R**. Additionally, we described how to compute descriptive or summary statistics and correlation analysis using R software.

This chapter contains articles describing **statistical tests** to use for **comparing means**. These tests include:

**T-test****Wilcoxon test****ANOVA test**and**Kruskal-Wallis test**

# 1 How this chapter is organized?

- Comparing one-sample mean to a standard known mean:
- Comparing the means of two independent groups:
- Comparing the means of paired samples:
- Comparing the means of more than two groups
- Analysis of variance (ANOVA, parametric):
- Kruskal-Wallis Test in R (non parametric alternative to one-way ANOVA)

# 2 Comparing one-sample mean to a standard known mean

## 2.1 One-sample T-test (parametric)

- What is one-sample t-test?
- Research questions and statistical hypotheses
- Formula of one-sample t-test
- Visualize your data and compute one-sample t-test in R
- R function to compute one-sample t-test
- Visualize your data using box plots
- Preliminary test to check one-sample t-test assumptions
- Compute one-sample t-test
- Interpretation of the result

Read more: —> One-Sample T-test.

## 2.2 One-sample Wilcoxon test (non-parametric)

- What’s one-sample Wilcoxon signed rank test?
- Research questions and statistical hypotheses
- Visualize your data and compute one-sample Wilcoxon test in R
- R function to compute one-sample Wilcoxon test
- Visualize your data using box plots
- Compute one-sample Wilcoxon test

Read more: —> One-Sample Wilcoxon Test (non-parametric).

# 3 Comparing the means of two independent groups

## 3.1 Unpaired two samples t-test (parametric)

- What is unpaired two-samples t-test?
- Research questions and statistical hypotheses
- Formula of unpaired two-samples t-test
- Visualize your data and compute unpaired two-samples t-test in R
- R function to compute unpaired two-samples t-test
- Visualize your data using box plots
- Preliminary test to check independent t-test assumptions
- Compute unpaired two-samples t-test

- Interpretation of the result

Read more: —> Unpaired Two Samples T-test (parametric).

## 3.2 Unpaired two-samples Wilcoxon test (non-parametric)

- R function to compute Wilcoxon test
- Visualize your data using box plots
- Compute unpaired two-samples Wilcoxon test

Read more: —> Unpaired Two-Samples Wilcoxon Test (non-parametric).

# 4 Comparing the means of paired samples

## 4.2 Paired samples Wilcoxon test (non-parametric)

Read more: —> Paired Samples Wilcoxon Test (non-parametric).

# 5 Comparing the means of more than two groups

## 5.1 One-way ANOVA test

An extension of independent two-samples **t-test** for comparing means in a situation where there are more than two groups.

- What is one-way ANOVA test?
- Assumptions of ANOVA test
- How one-way ANOVA test works?
- Visualize your data and compute one-way ANOVA in R
- Visualize your data
- Compute one-way ANOVA test
- Interpret the result of one-way ANOVA tests
- Multiple pairwise-comparison between the means of groups
- Tukey multiple pairewise-comparisons
- Multiple comparisons using multcomp package
- Pairwise t-test

- Check ANOVA assumptions: test validity?
- Check the homogeneity of variance assumption
- Relaxing the homogeneity of variance assumption
- Check the normality assumption

- Non-parametric alternative to one-way ANOVA test

Read more: —> One-Way ANOVA Test in R.

## 5.2 Two-Way ANOVA test

- What is two-way ANOVA test?
- Two-way ANOVA test hypotheses
- Assumptions of two-way ANOVA test
- Compute two-way ANOVA test in R: balanced designs
- Visualize your data
- Compute two-way ANOVA test
- Interpret the results
- Compute some summary statistics
- Multiple pairwise-comparison between the means of groups
- Tukey multiple pairewise-comparisons
- Multiple comparisons using multcomp package
- Pairwise t-test

- Check ANOVA assumptions: test validity?
- Check the homogeneity of variance assumption

- Check the normality assumption

- Compute two-way ANOVA test in R for unbalanced designs

Read more: —> Two-Way ANOVA Test in R.

# 6 MANOVA test: Multivariate analysis of variance

- What is MANOVA test?
- Assumptions of MANOVA
- Interpretation of MANOVA
- Compute MANOVA in R

Read more: —> MANOVA Test in R: Multivariate Analysis of Variance.

# 7 Kruskal-Wallis test

- What is Kruskal-Wallis test?
- Visualize your data and compute Kruskal-Wallis test in R
- Visualize the data using box plots
- Compute Kruskal-Wallis test
- Multiple pairwise-comparison between groups

Read more: —> Kruskal-Wallis Test in R (non parametric alternative to one-way ANOVA).

# 8 See also

# 9 Infos

This analysis has been performed using **R statistical software** (ver. 3.2.4).

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**Categories contained by this category :**

t test

**Articles contained by this category :**

Kruskal-Wallis Test in R

MANOVA Test in R: Multivariate Analysis of Variance

One-Sample T-test in R

One-Sample Wilcoxon Signed Rank Test in R

One-Way ANOVA Test in R

Paired Samples T-test in R

Paired Samples Wilcoxon Test in R

t test formula

Two-Way ANOVA Test in R

Unpaired Two-Samples T-test in R

Unpaired Two-Samples Wilcoxon Test in R