Install samtools on UNIX system

Samtools is a useful tool for manipulating and visualizing .bam files.

Installation




1. Download the most current version from the Samtools website.

2. Unzip the file:
Code BASH :
tar xvjf samtools-1.1.tar.bz2


3. Go into the newly created directory and compile the code by typing make:
Code BASH :
 
cd samtools-1.1
make
 


4. Modify your .bashrc file so that when you type "samtools" it calls the program:
Code BASH :
export PATH=$PATH:/directory/samtools-0.1.19


Directory is equal to the directory that you have installed Samtools in.

Enjoyed this article? I’d be very grateful if you’d help it spread by emailing it to a friend, or sharing it on Twitter, Facebook or Linked In.

Show me some love with the like buttons below... Thank you and please don't forget to share and comment below!!
Avez vous aimé cet article? Je vous serais très reconnaissant si vous aidiez à sa diffusion en l'envoyant par courriel à un ami ou en le partageant sur Twitter, Facebook ou Linked In.

Montrez-moi un peu d'amour avec les like ci-dessous ... Merci et n'oubliez pas, s'il vous plaît, de partager et de commenter ci-dessous!





This page has been seen 59368 times